Oberseminar Computational Genomics
Module IN2122
Lecturer Julien Gagneur
Room tba
Time Wednesdays, 9:00 - 10:30
Timetable
| Wed, Apr 7 | Nils Wagner | Enhanced SpliceMap and RNA-seq from clinically accessible tissues improves outlier prediction for non-accessible tissues |
| Wed, Apr 14 | Justus Bredthauer | Improving common insertion site detection in transposon mutagenesis screens |
| Wed, Apr 21 | Oguz Gültepe | De Novo Sequencing Using Reinforcement Learning |
| Wed, Apr 28 | Felix Brechtmann | Disease Prediction Models - And their Interpretation for Gene Prioritization |
| Wed, May 5 | Ines Scheller | Detection of aberrant molecular events in -omics data |
| Wed, May 12 | Daniela Klaproth-Andrade | De Novo Sequencing with Combinatorial Optimization and Deep Learning |
| Wed, May 19 | Alexander Karollus | RMD9L: a tale of two paralogues |
| Wed, May 26 | Jakob Träuble | Scoring De Novo Peptide Sequencing Identifications Using Full Tandem Mass Spectra and Deep Learning |
| Wed, Jun 9 | Laura Martens | Detection of sequence-based determinants of mRNA half-life using single cell data |
| Wed, Jun 16 | Thomas Eidens | Improving VariantDatabase performance for analysis of UK BioBank WES 200K data |
| Wed, Jun 23 | Christian Mertes | FAIR Bioinformatics Workflows for GHGA |
| Wed, Jun 30 | Vangelis Theodorakis, Pedro Tomaz da Silva | From code to codons: On the contribution of codons to mRNA stability across conditions |
| Wed, Jul 7 | Kalin Nonchev | Benchmarking of two UTR Annotation Tools, their Implementation into an annotation Pipeline and the Investigation of clinically reported UTR-variants |
| Wed, Jul 14 | Felix Brechtmann | Disease Prediction Models - And their Interpretation for Gene Prioritization |
| Wed, Jul 21 | Prof. Dr.-Ing. Pramod Bhatotia | |
| Wed, Jul 28 | Vicente Yépez | Genetic predisposition to severe COVID-19 |
| Wed, Aug 4 | Florian Hölzlwimmer | Multi-tissue prediction of aberrant gene regulation |
| Wed, Sept 1 | Xueqi Cao | Systematic evaluation of leukemia driver genes – using 4200 leukemia genome and transcriptome data |
| Wed, Sept 8 | Katalin Voss | Benchmarking of Algorithms for Rare Variant Association Study |
| Wed, Sept 15 | Prof. Dr. Peter Schüffler | AI in pathology – a small overview |
| Wed, Sept 22 | Nils Wagner | Aberrant splicing prediction across human tissues |
| Wed, Sept 29 | Alexander Karollus | Towards a general model of the cis-regulatory code in (simple) eukaryotes |